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-In [36]:
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-## Handle secrets either from env vars or streamlit manager
-import streamlit as st
-import os
-api_key = os.getenv("LITELLM_KEY")
-if api_key is None:
- api_key = st.secrets["LITELLM_KEY"]
-cirrus_key = os.getenv("CIRRUS_KEY")
-if cirrus_key is None:
- cirrus_key = st.secrets["CIRRUS_KEY"]
-
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-In [37]:
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-import os
-import requests
-import zipfile
-
-def download_and_unzip(url, output_dir):
- response = requests.get(url)
- zip_file_path = os.path.basename(url)
- with open(zip_file_path, 'wb') as f:
- f.write(response.content)
- with zipfile.ZipFile(zip_file_path, 'r') as zip_ref:
- zip_ref.extractall(output_dir)
- os.remove(zip_file_path)
-
-download_and_unzip("https://minio.carlboettiger.info/public-data/hwc.zip", "hwc")
-
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-In [38]:
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-import pathlib
-from langchain_community.document_loaders import PyPDFLoader
-
-def pdf_loader(path):
- all_documents = []
- docs_dir = pathlib.Path(path)
- for file in docs_dir.iterdir():
- loader = PyPDFLoader(file)
- documents = loader.load()
- all_documents.extend(documents)
- return all_documents
-
-docs = pdf_loader('hwc/')
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-In [39]:
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-# NRP embedding model tends to throw errors
-# embedding = OpenAIEmbeddings(model = "embed-mistral", api_key = api_key, base_url = "https://llm.nrp-nautilus.io")
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-In [40]:
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-## Use the model on Cirrus instead:
-
-from langchain_openai import OpenAIEmbeddings
-embedding = OpenAIEmbeddings(
- model = "cirrus",
- api_key = cirrus_key,
- base_url = "https://llm.cirrus.carlboettiger.info/v1",
-)
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-In [41]:
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-# Build a retrival agent
-from langchain_text_splitters import RecursiveCharacterTextSplitter
-text_splitter = RecursiveCharacterTextSplitter(chunk_size=5000, chunk_overlap=500)
-splits = text_splitter.split_documents(docs)
-
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-In [42]:
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-# slow part here, runs on remote GPU
-from langchain_core.vectorstores import InMemoryVectorStore
-vectorstore = InMemoryVectorStore.from_documents(documents = splits, embedding = embedding)
-retriever = vectorstore.as_retriever()
-
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-In [43]:
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-# Choose any of the models listed by their short-name:
-# see `curl -H "Authorization: Bearer $OPENAI_API_KEY" https://llm.nrp-nautilus.io/v1/models`
-"""
-models = {"llama3": "llama3-sdsc",
- "deepseek-small": "DeepSeek-R1-Distill-Qwen-32B",
- "deepseek": "deepseek-r1-qwen-qualcomm",
- "gemma3": "gemma3",
- "phi3": "phi3",
- "olmo": "olmo"
- }
-"""
-from langchain_openai import ChatOpenAI
-#llm = ChatOpenAI(model = models['gemma3'],
- #api_key = api_key,
- #base_url = "https://llm.nrp-nautilus.io",
- #temperature=0)
-
-
-from langchain.chains import create_retrieval_chain
-from langchain.chains.combine_documents import create_stuff_documents_chain
-from langchain_core.prompts import ChatPromptTemplate
-
-system_prompt = (
- "You are an assistant for question-answering tasks. "
- "Use the following scientific articles as the retrieved context to answer "
- "the question. Appropriately cite the articles from the context on which your answer is based using (Author, Year) format. "
- "Do not attempt to cite articles that are not in the context."
- "If you don't know the answer, say that you don't know."
- "Use up to five sentences maximum and keep the answer concise.\n\n"
- "{context}"
-)
-"""
-prompt = ChatPromptTemplate.from_messages(
- [
- ("system", system_prompt),
- ("human", "{input}"),
- ]
-)
-question_answer_chain = create_stuff_documents_chain(retriever, prompt)
-rag_chain = create_retrieval_chain(retriever, question_answer_chain)
-"""
-
-def test_retriever_only(query: str, k: int = 5):
- retriever.search_kwargs["k"] = k # restrict top-k results
- retrieved_docs = retriever.invoke(query)
-
- print(f"\n🔍 Query: {query}")
- print(f"\n📄 Top {k} Retrieved Documents:\n" + "-"*60)
-
- for i, doc in enumerate(retrieved_docs):
- print(f"\n--- Document #{i+1} ---")
- print(doc.page_content[:1000]) # preview first 1000 chars
- if hasattr(doc, "metadata") and doc.metadata:
- print("\n[Metadata]:", doc.metadata)
-
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-In [62]:
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-test_query = "I live in Tanzania and am having issues with lions breaking into my boma and preying on cattle. What are a few ways to help me prevent this from happening in the future? "
-test_retriever_only(test_query, k=5)
-test_retriever_only
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--🔍 Query: I live in Tanzania and am having issues with lions breaking into my boma and preying on cattle. What are a few ways to help me prevent this from happening in the future? - -📄 Top 5 Retrieved Documents: ------------------------------------------------------------- - ---- Document #1 --- -23. Carbone C, Teacher A, Rowcliffe JM. The costs of carnivor y. PLoS Biol. 2007; 5: 0363–0368. https:// -doi.org/10.13 71/journal.p bio.0050022 PMID: 17227145 -24. Grant J, Hopcraft C, Sinclair ARE, Packer C. Planning for success: Serenget i lions seek prey accessib il- -ity rather than abundance. J Anim Ecol. 2005; 74: 559–566. https://d oi.org/10.111 1/j.1365 -2656.2005. -00955.x -25. Tuqa. The Impact of Climate Variability on the Ecology of a Lion (Panthera leo Linnae us 1758) Popula- -tion and Lion-Lives tock Conflicts in the Amboseli Ecosyste m-Kenya . University of Leiden . 2015. -LED flashlight technique in reducing livestoc k depredation by Lions (Panthera leo) -PLOS ONE | https://doi.or g/10.137 1/journal.po ne.01908 98 January 31, 2018 17 / 18 - -[Metadata]: {'producer': 'PDFlib+PDI 8.0.2p1 (C++/Win64); modified using iTextSharp™ 5.5.3 ©2000-2014 iText Group NV (AGPL-version)', 'creator': 'Arbortext Advanced Print Publisher 11.0.2857/W Unicode-x64', 'creationdate': '2018-01-10T21:11:13+05:30', 'title': 'Effectiveness of a LED flashlight technique in reducing livestock depredation by lions (Panthera leo) around Nairobi National Park, Kenya', 'eps_processor': 'PStill version 1.76.22', 'moddate': '2018-01-10T21:12:24+05:30', 'author': "Francis Lesilau, Myrthe Fonck, Maria Gatta, Charles Musyoki, Maarten van 't Zelfde, Gerard A. Persoon, Kees C. J. M. Musters, Geert R. de Snoo, Hans H. de Iongh", 'source': 'hwc\\Lesilau et al. 2018.pdf', 'total_pages': 18, 'page': 16, 'page_label': '17'} - ---- Document #2 --- -Bomas constructed with high wooden post supported by chain-link (χ -2 -= 8.1131, df = 1, p- -value < 0.005) and barbed wire with post fence, were attacked less frequently than the other -categories (p <0.05, Fig 8). None of the other deterrence variables (scare crow, dogs, spotlight, -Table 1. GLMER showing the significance variables in relation to predation around the park using likeliho od ratio test. -Variables Df AIC LRT Pr(Chi) Significa nce -Flashlight 1 743.92 14.303 0.0001556 - -Years 1 742.83 13.220 0.0002770 - -Mean Rainfall 1 741.64 12.029 0.0005237 - -Park Distance 1 743.95 14.333 0.0001532 - -Significance codes: 0 ‘ - -’, 0.001 ‘ - -’, 0.01 ‘ - -’, 0.05’.’, 0.1 ’ ’, 1[ - -] represent s the reference variable. -Model 1: Attnight ~ Flashlight + Year + Mean Rainfall + Park Distance+ (1 | Code) + (1 | Years) -https://do i.org/10.1371/j ournal.pone .0190898.t001 -Fig 6. Mean number of nocturnal and diurnal boma attacks around NNP between 2007 and 2016 at different dista - -[Metadata]: {'producer': 'PDFlib+PDI 8.0.2p1 (C++/Win64); modified using iTextSharp™ 5.5.3 ©2000-2014 iText Group NV (AGPL-version)', 'creator': 'Arbortext Advanced Print Publisher 11.0.2857/W Unicode-x64', 'creationdate': '2018-01-10T21:11:13+05:30', 'title': 'Effectiveness of a LED flashlight technique in reducing livestock depredation by lions (Panthera leo) around Nairobi National Park, Kenya', 'eps_processor': 'PStill version 1.76.22', 'moddate': '2018-01-10T21:12:24+05:30', 'author': "Francis Lesilau, Myrthe Fonck, Maria Gatta, Charles Musyoki, Maarten van 't Zelfde, Gerard A. Persoon, Kees C. J. M. Musters, Geert R. de Snoo, Hans H. de Iongh", 'source': 'hwc\\Lesilau et al. 2018.pdf', 'total_pages': 18, 'page': 10, 'page_label': '11'} - ---- Document #3 --- -attacks, due to economic losses[6,7]. In West and Central Africa, lion mortality due to retalia- -tory killing is a major concern as the few remaining lion populations have reached critically -low densities [4,8–10]. For conservationists working in these areas, conflict retaliation has -therefore become a main priority [4,7,10,11]. -We explored a novel method for reducing human-lion conflict in Kenya. Kenya is a strong- -hold for lions, with an estimated population of 2,000 individuals in 2008 [12]. With an esti- -mated population of 35 lions including cubs, Nairobi National Park (NNP) in Kenya the lions -are surviving despite its relative confinement inside the park surrounded by a densely populated -urban area. Although the park is largely fenced [13], an unfenced connection between the -southern border of the park and the Athi-Kapiti Plains [14] provides a wildlife migratory corri- -dor and a possibility for lions to roam into surrounding communities. The intensified human -demand for space ar - -[Metadata]: {'producer': 'PDFlib+PDI 8.0.2p1 (C++/Win64); modified using iTextSharp™ 5.5.3 ©2000-2014 iText Group NV (AGPL-version)', 'creator': 'Arbortext Advanced Print Publisher 11.0.2857/W Unicode-x64', 'creationdate': '2018-01-10T21:11:13+05:30', 'title': 'Effectiveness of a LED flashlight technique in reducing livestock depredation by lions (Panthera leo) around Nairobi National Park, Kenya', 'eps_processor': 'PStill version 1.76.22', 'moddate': '2018-01-10T21:12:24+05:30', 'author': "Francis Lesilau, Myrthe Fonck, Maria Gatta, Charles Musyoki, Maarten van 't Zelfde, Gerard A. Persoon, Kees C. J. M. Musters, Geert R. de Snoo, Hans H. de Iongh", 'source': 'hwc\\Lesilau et al. 2018.pdf', 'total_pages': 18, 'page': 1, 'page_label': '2'} - ---- Document #4 --- -Similar to results from other studies [4,22,35], our findings show that increased rainfall is -related to higher livestock depredation frequencies. This is a common phenomenon which is -associated with a greater dispersal by both lions and their natural wild prey species during the -wet season due to an increased and more widespread availability of both water and pasture -after the rains [19]. Rainfall in the study area was highest during the 2011–2012 season, which -was also the peak for livestock depredation. -Despite the great variation in reports on the importance of boma characteristics and con- -struction materials [20,27,35] in the prevention of attacks onlivestock by large carnivores, it is -generally agreed that improved enclosures as well as both night and day time vigilance reduces -the rate of livestock depredation [7,8,10,20]. The improved fencing techniques used in studies -such as “Living walls bomas” [35,36] and “predator-proof bomas” [29] demonstrated success -rates which were si - -[Metadata]: {'producer': 'PDFlib+PDI 8.0.2p1 (C++/Win64); modified using iTextSharp™ 5.5.3 ©2000-2014 iText Group NV (AGPL-version)', 'creator': 'Arbortext Advanced Print Publisher 11.0.2857/W Unicode-x64', 'creationdate': '2018-01-10T21:11:13+05:30', 'title': 'Effectiveness of a LED flashlight technique in reducing livestock depredation by lions (Panthera leo) around Nairobi National Park, Kenya', 'eps_processor': 'PStill version 1.76.22', 'moddate': '2018-01-10T21:12:24+05:30', 'author': "Francis Lesilau, Myrthe Fonck, Maria Gatta, Charles Musyoki, Maarten van 't Zelfde, Gerard A. Persoon, Kees C. J. M. Musters, Geert R. de Snoo, Hans H. de Iongh", 'source': 'hwc\\Lesilau et al. 2018.pdf', 'total_pages': 18, 'page': 13, 'page_label': '14'} - ---- Document #5 --- -radio, fire and noise) were significant in predation prevention (see S1 Table).Herd size did not -affect nocturnal predation of shoats (Kruskal test, χ -2 -= 21.76, p-value = 0.7) and cattle (χ -2 -25, -p-value = 0.6) (see S1 Table). -When respondents were asked an open question on what they believed should be done to -resolve human-lion conflicts around NNP, (Appendix I, question 13), most respondents -(92%) had one or more suggestions (S3 Table): “flashlight installation” and “some form of -compensation” were by far the most mentioned suggestions, followed by measures that would -prevent lions from roaming outside the park boundaries. Although “fencing the park” was -sometimes mentioned, 62% of the respondents did not believe that complete fencing of the -park would resolve the human-lion conflict. Suggestions further included measures that could -rapidly detect and relocate freely roaming lions back to the park, which according to some will -become even more important when the announced plans for - -[Metadata]: {'producer': 'PDFlib+PDI 8.0.2p1 (C++/Win64); modified using iTextSharp™ 5.5.3 ©2000-2014 iText Group NV (AGPL-version)', 'creator': 'Arbortext Advanced Print Publisher 11.0.2857/W Unicode-x64', 'creationdate': '2018-01-10T21:11:13+05:30', 'title': 'Effectiveness of a LED flashlight technique in reducing livestock depredation by lions (Panthera leo) around Nairobi National Park, Kenya', 'eps_processor': 'PStill version 1.76.22', 'moddate': '2018-01-10T21:12:24+05:30', 'author': "Francis Lesilau, Myrthe Fonck, Maria Gatta, Charles Musyoki, Maarten van 't Zelfde, Gerard A. Persoon, Kees C. J. M. Musters, Geert R. de Snoo, Hans H. de Iongh", 'source': 'hwc\\Lesilau et al. 2018.pdf', 'total_pages': 18, 'page': 11, 'page_label': '12'} --
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-Out[62]:
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-<function __main__.test_retriever_only(query: str, k: int = 5)>-
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-In [64]:
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-test_query = "What should I do if elephants are destroying my crops? And what are the most cost-effective prevention methods, if there are any you know of?"
-test_retriever_only(test_query, k=5)
-test_retriever_only
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--🔍 Query: What should I do if elephants are destroying my crops? And what are the most cost-effective prevention methods, if there are any you know of? - -📄 Top 5 Retrieved Documents: ------------------------------------------------------------- - ---- Document #1 --- -242 Conflict Intervention Priorities -helps foster more effective collaboration (Game et al. -2013; Lute et al. 2018). Third, both the survey results -and feedback were consistent with recent scholarship -(Redpath et al. 2017) that highlights participatory and -stakeholder-first conflict interventions as best practice -and advocates multipronged (Hazzah et al. 2014) and -adaptive management strategies (Bunnefeld et al. 2017). -Education and awareness programs were often cited in -feedback as being necessary additions to any interven- -tions. However, given the failures of many awareness- -based conservation programs (Schultz 2011), a further -exploration into why and where conservation decision -makers deem them most appropriate is important. Ap- -proaches that are specifically aimed at a particular au- -dience, such as social marketing (Salazar et al. 2018), -may be more effective than simple information provision -or—often-problematic—enforcement (Duffy et al. 2019). -However, how different interventio - -[Metadata]: {'producer': 'Acrobat Distiller 10.1.10 (Windows); modified using iText 4.2.0 by 1T3XT', 'creator': 'LaTeX with hyperref package', 'creationdate': '2020-01-16T12:33:42+05:30', 'keywords': '', 'moddate': '2025-05-27T12:12:25-07:00', 'subject': 'Conservation Biology 2020.34:232-243', 'wps-proclevel': '3', 'wps-journaldoi': '10.1111/(ISSN)1523-1739', 'author': '', 'title': 'Predicting intervention priorities for wildlife conflicts', 'wps-articledoi': '10.1111/cobi.13372', 'source': 'hwc\\Baynham-Herd et al. 2019.pdf', 'total_pages': 12, 'page': 10, 'page_label': '242'} - ---- Document #2 --- -3 -Vol.:(0123456789)Scientific RepoRtS | (2020) 10:15341 | https://doi.org/10.1038/s41598-020-72343-6 -www.nature.com/scientificreports/ -numbers increase and more bears need more food26,43,44. Hence, the effectiveness of anti-bear interventions can -be lower than expected when hungry bears become persistent and more aggressive in damaging behaviour. As -high density may lead to more bears involved in conflicts, it also could increase the demand for bear removal45 -and affect the effectiveness of removal techniques such as translocation and lethal control. -In this paper, we compiled a global database of intervention effectiveness against bears and studied how it -is related to bear species and densities, duration of intervention application, and intervention techniques. We -attempted to find and describe the most effective and the least effective interventions against bears. Further, we -tested several hypotheses: (1) lethal control and invasive management are less effective th - -[Metadata]: {'producer': 'Adobe PDF Library 15.0; modified using iText® 5.3.5 ©2000-2012 1T3XT BVBA (SPRINGER SBM; licensed version)', 'creator': 'Springer', 'creationdate': '2020-09-14T15:09:33+05:30', 'crossmarkdomains[1]': 'springer.com', 'moddate': '2020-09-14T15:58:07+02:00', 'crossmarkmajorversiondate': '2010-04-23', 'subject': 'Scientific Reports, https://doi.org/10.1038/s41598-020-72343-6', 'author': 'Igor Khorozyan', 'title': 'Variation and conservation implications of the effectiveness of anti-bear interventions', 'crossmarkdomainexclusive': 'true', 'robots': 'noindex', 'doi': '10.1038/s41598-020-72343-6', 'crossmarkdomains[2]': 'springerlink.com', 'source': 'hwc\\Khorozyan and Waltert 2020.pdf', 'total_pages': 9, 'page': 2, 'page_label': '3'} - ---- Document #3 --- -L~J;~...' -¿- ~1i -~ø~~/ -,'~ '~J-'::~;"~' ~-~ -'- -a -c -b -..--~ -1- -~~- -, :~';~'?'". --1~~~~f~':".o.,".~.~) ~ -ç J)';i-ir,i.();::u-::::;v' -~d/idlj¡ti# - ""... .. . '. ý.o:.. .1l)"',y'A 'jt:) -.: .' ~:-~J.~,,:::;:,'."'h _ .. " i.-/ J. l1?~"P~.o~'::~ ....( I:? ~'J.J.I -'-~:~.éiiA~~t~'?:,)J -~ -e -¡=j'~0'Ó .~ -! r- ..'7~l)S, -. '~RfÖ'~~j£'"J;').,;.... i -/!Æ,?-:''~, j -q~ f\ .;- .J')~~:' -' i -(1" -Fig. /8. a. A leg-hold trap is first laid on the ground to detemiine best location of hole. b. The hole should be about II cm deep and shape to -accommodate the trap. c. If a stake is used. it is driven into the boHom of the hole. If a drag is used, it is placed in the hole. The chain is then put -into the hole and covered with soil unlIlthe hole is about 3 cm deep and packed to provide a firm foundation. d. TIie front jaw is raised and the pan -cover is placed over the pan so soil cannot get under the pan. e. The trap is covered with finely sifted soil to a depth of 0.6-1.2 cm. A siick or whisk -broom is used to to - -[Metadata]: {'producer': 'Canon iR C5800', 'creator': 'Canon iR C5800', 'creationdate': '2009-03-09T08:39:40-05:00', 'subject': 'Image', 'source': 'hwc\\Dolbeer et al. 1994.pdf', 'total_pages': 34, 'page': 27, 'page_label': '28'} - ---- Document #4 --- -gered and 'protected by state and federal laws. Control -operators unfamiliar with bat identification are urged to -sek professional help from wildlife agencies or univer- -sities (Frantz 1986). -The presence of bats in a building usually is evidenced -by noise (squeaking, scratching) and by the presence and -distinctive, pungent odor of the accumulated fecal drop- -pings and urine. Bat feces are readily identified from those -of rodents by odor, insect content, and the ease with which -they are crushed (Greenhall 1982). -Many people are feanul of bats and panic in their pres- -ence. Bats occasionally contract rabics, and, although few -human deaths have resulted from bat-transmitted rabies -(Green hall i 982), contact with a rabid bat or a bite by a -bat that escapes requires pòstexposurc trcatmcnt of people -and pets without current vaccinations (Frantz 1986). -Where bat colonies are allowed to pcrsist so that guano -deposits accumulate, the fungus that causcs histoplasmosis -can develop. Bats roostin - -[Metadata]: {'producer': 'Canon iR C5800', 'creator': 'Canon iR C5800', 'creationdate': '2009-03-09T08:39:40-05:00', 'subject': 'Image', 'source': 'hwc\\Dolbeer et al. 1994.pdf', 'total_pages': 34, 'page': 10, 'page_label': '11'} - ---- Document #5 --- -Fig 1. The effects of AC programs on three metrics of black bear wariness, Whistler BC, 2007–2008. A and B show -the average observed percent change in overt reaction distance and displace ment distance among bears in the AC -Group and the Control Group. Error bars represent standard error. C shows the predicted effect of the number of AC -events conduc ted during the previous 30 days on the likeliho od that a bear will flee from research ers prior to their -beginning AC treatm ent. -https://d oi.org/10.1371/j ournal.pon e.0295989.g0 01 -PLOS ONE -Aversive condition ing of conflict black bears -PLOS ONE | https://doi.or g/10.137 1/journal.po ne.02959 89 January 2, 2024 8 / 19 - -[Metadata]: {'producer': 'PDFlib+PDI 9.3.1p2 (C++/Win64)', 'creator': 'PTC Arbortext Layout Developer 12.1.6180/W-x64', 'creationdate': '2023-12-25T16:46:13+05:30', 'title': 'Aversive conditioning increases short-term wariness but does not change habitat use in black bears associated with conflict', 'epsprocessor': 'PStill version 1.84.42', 'author': 'Lori Homstol, Sage Raymond, Claire Edwards, Anthony N. Hamilton, Colleen Cassady St. Clair', 'moddate': '2023-12-25T16:46:13+05:30', 'source': 'hwc\\Homstol et al. 2024.pdf', 'total_pages': 19, 'page': 7, 'page_label': '8'} --
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-test_query = "I know jaguars can prey on goats and cattle, which I have; what measures can I take to save them from getting harmed? Can you check these pdfs to see which ones might help?"
-test_retriever_only(test_query, k=5)
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--🔍 Query: I know jaguars can prey on goats and cattle, which I have; what measures can I take to save them from getting harmed? Can you check these pdfs to see which ones might help? - -📄 Top 5 Retrieved Documents: ------------------------------------------------------------- - ---- Document #1 --- -hypothesis was that index of pre- and post-ban use -was the same for both types of feeding sites. -We calculated the average annual number of -observed bears during pre- and post-ban periods -for each feeding site. We then used these averages -instead of raw data from individual counts. We -calculated an annual index of feeding site use by -pooling data from all feeding sites (average number -of bears counted at feeding sites in post-ban period -divided by average number of bears counted in pre- -ban period). Subsequently, we used bootstrapping -with 1,000 simulations to test for differences between -SUPPLEMENTAL FEEDING AND BEAR DEPREDATIONS N Kavcˇicˇ et al. 113 -Ursus 24(2):111–119 (2013) - -[Metadata]: {'producer': 'GPL Ghostscript 9.26', 'creator': '', 'creationdate': '2022-06-06T23:09:49-07:00', 'moddate': '2022-06-06T23:09:49-07:00', 'title': '', 'author': '', 'subject': '', 'keywords': '', 'source': 'hwc\\Kavcic et al. 2013.pdf', 'total_pages': 9, 'page': 2, 'page_label': '3'} - ---- Document #2 --- -1 -Vol.:(0123456789)Scientific RepoRtS | (2020) 10:15341 | https://doi.org/10.1038/s41598-020-72343-6 -www.nature.com/scientificreports -Variation and conservation -implications of the effectiveness -of anti‑bear interventions -igor Khorozyan* & Matthias Waltert -Human-bear conflicts triggered by nuisance behaviour in public places and damage to livestock, crops, -beehives and trees are among the main threats to bear populations globally. The effectiveness of -interventions used to minimize bear-caused damage is insufficiently known and comparative reviews -are lacking. We conducted a meta-analysis of 77 cases from 48 publications and used the relative -risk of damage to compare the effectiveness of non-invasive interventions, invasive management -(translocations) and lethal control (shooting) against bears. We show that the most effective -interventions are electric fences (95% confidence interval = 79.2–100% reduction in damage), calving -control (100%) and livestock replacement - -[Metadata]: {'producer': 'Adobe PDF Library 15.0; modified using iText® 5.3.5 ©2000-2012 1T3XT BVBA (SPRINGER SBM; licensed version)', 'creator': 'Springer', 'creationdate': '2020-09-14T15:09:33+05:30', 'crossmarkdomains[1]': 'springer.com', 'moddate': '2020-09-14T15:58:07+02:00', 'crossmarkmajorversiondate': '2010-04-23', 'subject': 'Scientific Reports, https://doi.org/10.1038/s41598-020-72343-6', 'author': 'Igor Khorozyan', 'title': 'Variation and conservation implications of the effectiveness of anti-bear interventions', 'crossmarkdomainexclusive': 'true', 'robots': 'noindex', 'doi': '10.1038/s41598-020-72343-6', 'crossmarkdomains[2]': 'springerlink.com', 'source': 'hwc\\Khorozyan and Waltert 2020.pdf', 'total_pages': 9, 'page': 0, 'page_label': '1'} - ---- Document #3 --- -L~J;~...' -¿- ~1i -~ø~~/ -,'~ '~J-'::~;"~' ~-~ -'- -a -c -b -..--~ -1- -~~- -, :~';~'?'". --1~~~~f~':".o.,".~.~) ~ -ç J)';i-ir,i.();::u-::::;v' -~d/idlj¡ti# - ""... .. . '. ý.o:.. .1l)"',y'A 'jt:) -.: .' ~:-~J.~,,:::;:,'."'h _ .. " i.-/ J. l1?~"P~.o~'::~ ....( I:? ~'J.J.I -'-~:~.éiiA~~t~'?:,)J -~ -e -¡=j'~0'Ó .~ -! r- ..'7~l)S, -. '~RfÖ'~~j£'"J;').,;.... i -/!Æ,?-:''~, j -q~ f\ .;- .J')~~:' -' i -(1" -Fig. /8. a. A leg-hold trap is first laid on the ground to detemiine best location of hole. b. The hole should be about II cm deep and shape to -accommodate the trap. c. If a stake is used. it is driven into the boHom of the hole. If a drag is used, it is placed in the hole. The chain is then put -into the hole and covered with soil unlIlthe hole is about 3 cm deep and packed to provide a firm foundation. d. TIie front jaw is raised and the pan -cover is placed over the pan so soil cannot get under the pan. e. The trap is covered with finely sifted soil to a depth of 0.6-1.2 cm. A siick or whisk -broom is used to to - -[Metadata]: {'producer': 'Canon iR C5800', 'creator': 'Canon iR C5800', 'creationdate': '2009-03-09T08:39:40-05:00', 'subject': 'Image', 'source': 'hwc\\Dolbeer et al. 1994.pdf', 'total_pages': 34, 'page': 27, 'page_label': '28'} - ---- Document #4 --- -Damage often is undetected until a tree shows above- -ground signs of stress; by then damage is frequently lethal -(Cummings and Marsh 1978). Pocket gophers also may -damage plastic irrigation lines on agncultural lands as -well as underground pipes and cables in other situations. -On rangeland, soil disturbance and mound building by -pocket gophers rcsult in increased plant diversity and a -rcplacement of perennial by annual grasses (McDonough -1974, Foster and Stubbendieck i 980, Marsh 1985a). They -can greatly rcduce the carring capacity of rangeland for -livestock. Gophcrs can be a serious pest in alfalfa by feed- -ing on the leaves, stems, and roots (Marsh 1985a). Gopher -mounds can cause equipment breakage and increascd -weanng ratc of haying machinery. Gopher tunnels result -in water loss in irrigated areas (Case and Jasch 1993). -Pockct gophers are a major impedimcnt to reforcstation -in the westcrn U.S. (Crouch 1986). During winter thcy -often forage above ground by tunneling in the snow. Co- - - -[Metadata]: {'producer': 'Canon iR C5800', 'creator': 'Canon iR C5800', 'creationdate': '2009-03-09T08:39:40-05:00', 'subject': 'Image', 'source': 'hwc\\Dolbeer et al. 1994.pdf', 'total_pages': 34, 'page': 13, 'page_label': '14'} - ---- Document #5 --- -242 Conflict Intervention Priorities -helps foster more effective collaboration (Game et al. -2013; Lute et al. 2018). Third, both the survey results -and feedback were consistent with recent scholarship -(Redpath et al. 2017) that highlights participatory and -stakeholder-first conflict interventions as best practice -and advocates multipronged (Hazzah et al. 2014) and -adaptive management strategies (Bunnefeld et al. 2017). -Education and awareness programs were often cited in -feedback as being necessary additions to any interven- -tions. However, given the failures of many awareness- -based conservation programs (Schultz 2011), a further -exploration into why and where conservation decision -makers deem them most appropriate is important. Ap- -proaches that are specifically aimed at a particular au- -dience, such as social marketing (Salazar et al. 2018), -may be more effective than simple information provision -or—often-problematic—enforcement (Duffy et al. 2019). -However, how different interventio - -[Metadata]: {'producer': 'Acrobat Distiller 10.1.10 (Windows); modified using iText 4.2.0 by 1T3XT', 'creator': 'LaTeX with hyperref package', 'creationdate': '2020-01-16T12:33:42+05:30', 'keywords': '', 'moddate': '2025-05-27T12:12:25-07:00', 'subject': 'Conservation Biology 2020.34:232-243', 'wps-proclevel': '3', 'wps-journaldoi': '10.1111/(ISSN)1523-1739', 'author': '', 'title': 'Predicting intervention priorities for wildlife conflicts', 'wps-articledoi': '10.1111/cobi.13372', 'source': 'hwc\\Baynham-Herd et al. 2019.pdf', 'total_pages': 12, 'page': 10, 'page_label': '242'} --
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-test_query = "I am trying to prevent coyotes from eating the calves of my free-range cattle. What may work best and incentivize them to stay away?"
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--🔍 Query: I am trying to prevent coyotes from eating the calves of my free-range cattle. What may work best and incentivize them to stay away? - -📄 Top 5 Retrieved Documents: ------------------------------------------------------------- - ---- Document #1 --- -hypothesis was that index of pre- and post-ban use -was the same for both types of feeding sites. -We calculated the average annual number of -observed bears during pre- and post-ban periods -for each feeding site. We then used these averages -instead of raw data from individual counts. We -calculated an annual index of feeding site use by -pooling data from all feeding sites (average number -of bears counted at feeding sites in post-ban period -divided by average number of bears counted in pre- -ban period). Subsequently, we used bootstrapping -with 1,000 simulations to test for differences between -SUPPLEMENTAL FEEDING AND BEAR DEPREDATIONS N Kavcˇicˇ et al. 113 -Ursus 24(2):111–119 (2013) - -[Metadata]: {'producer': 'GPL Ghostscript 9.26', 'creator': '', 'creationdate': '2022-06-06T23:09:49-07:00', 'moddate': '2022-06-06T23:09:49-07:00', 'title': '', 'author': '', 'subject': '', 'keywords': '', 'source': 'hwc\\Kavcic et al. 2013.pdf', 'total_pages': 9, 'page': 2, 'page_label': '3'} - ---- Document #2 --- -depredation rates on domestic sheep (i.e. risk-taking behaviours) -increased when coyotes were energetically challenged during -whelping and provisioning of pups, and that removing pups from a -territorial, depredating breeding pair reduced predation rates on -sheep. In subsequent research, sterilized coyotes reduced predation -rates on domestic lambs six- to eight-fold without affecting social -behaviour and territory maintenance (Bromley & Gese, 2001a, -2001b). Thus, anticipating how carnivores might shift their -behaviour in response to available resources and in relation to the -relative costs associated with anthropogenic‘predatory stimuli’ is -critical for carnivoreeconflict mitigation. -Complementing management strategies intended to lessen the -energetic reward associated with risk-taking behaviours are efforts -designed to modify or interrupt a carnivore's predatory sequence -(i.e. killing livestock;Knowlton, Gese,& Jaeger, 1999; Shivik, 2006). -Here, we emphasize that the predatory sequence - -[Metadata]: {'producer': 'Acrobat Distiller 8.1.0 (Windows)', 'creator': 'Elsevier', 'creationdate': '2016-09-26T20:02:29+05:30', 'crossmarkdomains[2]': 'elsevier.com', 'crossmarkmajorversiondate': '2010-04-23', 'subject': 'Animal Behaviour, 120 (2016) 245-254. doi:10.1016/j.anbehav.2016.07.013', 'author': 'Bradley F. Blackwell', 'elsevierwebpdfspecifications': '6.5', 'crossmarkdomainexclusive': 'true', 'robots': 'noindex', 'moddate': '2016-09-26T20:03:01+05:30', 'doi': '10.1016/j.anbehav.2016.07.013', 'crossmarkdomains[1]': 'sciencedirect.com', 'title': 'No single solution: application of behavioural principles in mitigating human-wildlife conflict', 'source': 'hwc\\Blackwell et al. 2016.pdf', 'total_pages': 10, 'page': 5, 'page_label': '250'} - ---- Document #3 --- -in each park. This model comprises a zero-inflated -submodel to assess the probability that coyotes were -reported on a certain park–week combination via a logis- -tic regression, and a conditional submodel that assessed -the abundance of coyote reports per park (or park area) -per week using a negative binomial regression. Potential -explanatory fixed-effect variables for this response vari- -able included coyote season, year, and the last aversive -conditioning treatment type prior to the reporting week if -aversive conditioning was conducted in the eight weeks -(56 days) prior to the week being evaluated. We also -investigated the role of the number of days since the last -aversive conditioning engagement, the number of aver- -sive conditioning engagements of coyotes by contractors -in the eight weeks prior to a reporting week (tallied sepa- -rately for each park or park area), and the number of -reports of coyote activity made to 311 in the eight weeks -prior to the reporting week (also tallied sep - -[Metadata]: {'producer': 'Acrobat Distiller 22.0 (Windows); modified using iText 4.2.0 by 1T3XT', 'creator': 'Arbortext Advanced Print Publisher 9.1.520/W Unicode', 'creationdate': '2023-10-10T06:27:55+05:30', 'moddate': '2025-05-27T12:15:21-07:00', 'subject': 'Ecosphere 2023.14:e4676', 'wps-proclevel': '3', 'wps-journaldoi': '10.1002/(ISSN)2150-8925', 'title': 'Proactive use of intensive aversive conditioning increases probability of retreat by coyotes', 'wps-articledoi': '10.1002/ecs2.4676', 'source': 'hwc\\Lajeunesse et al. 2023.pdf', 'total_pages': 17, 'page': 6, 'page_label': '7'} - ---- Document #4 --- -58 EV ALUATING BEAR EDUCATION -TABLE 2 -Questions Grouped in Indices Based on a Factor Analysis (N = 153) -Initial Eigen -values∗ -% of Component ∗ -Total variance loadings -Index A: Attitude toward bear protection (Cronbach’sα = 0.63) -It is good to have the RECAY? (5-point scale) 2 .049 51 .235 0 .742 -Do you believe the RECAY is needed for bear survival? (5-point scale) 0 .893 22 .329 0 .737 -Do bears need to be protected? (yes = 1/no = 0) 0 .604 15 .103 0 .644 -Are laws to protect bears needed? (yes = 1/no = 0) 0 .453 11 .333 0 .736 -Index B: Attitude toward bear presence (Cronbach’sα = 0.53) -Name three animals that are detrimental to your livelihood -(bear is named = 0; not named = 1) -1.809 45 .224 0 .670 -Name three animals that are beneficial to your livelihood -(bear is named = 0; not named = 1) -0.848 21 .190 0 .604 -Are there currently more bears than in the past? (3-point scale) 0 .770 19 .262 0 .764 -Would you prefer that there are more or less bears in the forest? -(5-point scale) -0.573 14 .3 - -[Metadata]: {'producer': 'Acrobat Distiller 6.0.1 (Windows)', 'creator': 'dvips(k) 5.95a Copyright 2005 Radical Eye Software', 'creationdate': '2011-11-09T13:01:02+05:30', 'moddate': '2011-11-09T13:01:23+05:30', 'title': 'Human-Wildlife Conflict and Environmental Education: Evaluating a Community Program to Protect the A', 'source': 'hwc\\Espinosa et al. 2011.pdf', 'total_pages': 12, 'page': 4, 'page_label': '58'} - ---- Document #5 --- -460 SELECTIVE REMOVAL OF COYOTES * Blejwas et al. J. Wildl. Manage. 66(2):2002 - lambs killed substantially more sheep than coy- - otes without access to lambs. One male whose - original territory did not overlap lambing pas- - tures was implicated in only 2 sheep kills over the - course of an entire year. After his mate died, he - merged his territory with that of a widowed - female in an adjacent lamb-access territory and - was subsequently implicated in 2 kills within a - month. Furthermore, at HREC, the same territo- - rial pairs that have access to small lambs during - the lambing season also have access to replace- - ment lambs during the summer and fall (Fig. 1). - Pairs in these territories killed sheep throughout - the year, a pattern that may have been encour- - aged by the continuing presence of replacement - lambs within the territory. - MANAGEMENT IMPLICATIONS - Previous studies have shown that breeding coy- - otes are responsible for most sheep depredations - (Till and Know - -[Metadata]: {'producer': 'iText® 5.5.8 ©2000-2015 iText Group NV (AGPL-version); modified using iText® 7.1.3 ©2000-2018 iText Group NV (JSTOR Michigan; licensed version)', 'creator': 'page2pdf-2.1', 'creationdate': '2016-08-07T19:47:10+00:00', 'moddate': '2020-09-14T14:51:37+00:00', 'title': 'The Effectiveness of Selective Removal of Breeding Coyotes in Reducing Sheep Predation', 'source': 'hwc\\Blejwas et al. 2002.pdf', 'total_pages': 13, 'page': 10, 'page_label': '461'} --
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-<function __main__.test_retriever_only(query: str, k: int = 5)>-
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-test_query = "Deers keep destroying and takiing over our large agricultural fields. Is there anything I can try to prevent this that won’t break the bank?"
-test_retriever_only(test_query, k=5)
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--🔍 Query: Deers keep destroying and takiing over our large agricultural fields. Is there anything I can try to prevent this that won’t break the bank? - -📄 Top 5 Retrieved Documents: ------------------------------------------------------------- - ---- Document #1 --- -and among lethal interventions, 48.6% investigated culling (N =1 7 ) , -34.3% retaliatory killing (N = 12), and 17.1% trophy-hunting (N =6 ) . -Contrary to the whole body of literature, most of these case studies were -located in the Neartic (63.6%) followed by the Afrotropic (24.5%) and -Paleartic (7.7%) (Fig. 3). Nonetheless, the species included in the case studies -reflected the generalfindings, with most of the management experiments -being conducted on wolves (29.4%) followed by bears (23.8%) and leopards -(16.1%) (Fig. 2). Surprisingly, almost none of the experiments were con- -ducted on tigers, despite their strong presence in the whole literature and -their heavy impact, including attacks on humans (Dhungana et al., 2016). -Fig. 2.Species prevalence in literature (black bars,N = 525) and case studies (gray bars, N = 143). -Fig. 3.Geographic prevalence in literature (black bars, N = 525) and case studies (gray bars,N = 143), with species involved per geographic area. In circles, mean result - -[Metadata]: {'producer': 'PyPDF', 'creator': 'Elsevier', 'creationdate': '2022-06-07T02:40:21+00:00', 'author': 'Charlotte Lorand', 'crossmarkdomains[1]': 'elsevier.com', 'crossmarkdomains[2]': 'sciencedirect.com', 'crossmarkdomainexclusive': 'true', 'crossmarkmajorversiondate': '2010-04-23', 'elsevierwebpdfspecifications': '7.0', 'keywords': 'Human-carnivore coexistence; Lethal control; Non-lethal management; Conservation interventions; Effectiveness; Evidence-based', 'moddate': '2022-06-07T02:40:21+00:00', 'subject': 'Science of the Total Environment, 838 (2022) 156195. doi:10.1016/j.scitotenv.2022.156195', 'title': "Effectiveness of interventions for managing human-large carnivore conflicts worldwide: Scare them off, don't remove them", 'doi': '10.1016/j.scitotenv.2022.156195', 'robots': 'noindex', 'source': 'hwc\\Lorand et al. 2022.pdf', 'total_pages': 11, 'page': 5, 'page_label': '6'} - ---- Document #2 --- -hypothesis was that index of pre- and post-ban use -was the same for both types of feeding sites. -We calculated the average annual number of -observed bears during pre- and post-ban periods -for each feeding site. We then used these averages -instead of raw data from individual counts. We -calculated an annual index of feeding site use by -pooling data from all feeding sites (average number -of bears counted at feeding sites in post-ban period -divided by average number of bears counted in pre- -ban period). Subsequently, we used bootstrapping -with 1,000 simulations to test for differences between -SUPPLEMENTAL FEEDING AND BEAR DEPREDATIONS N Kavcˇicˇ et al. 113 -Ursus 24(2):111–119 (2013) - -[Metadata]: {'producer': 'GPL Ghostscript 9.26', 'creator': '', 'creationdate': '2022-06-06T23:09:49-07:00', 'moddate': '2022-06-06T23:09:49-07:00', 'title': '', 'author': '', 'subject': '', 'keywords': '', 'source': 'hwc\\Kavcic et al. 2013.pdf', 'total_pages': 9, 'page': 2, 'page_label': '3'} - ---- Document #3 --- -in baboon space use patterns and foraging activity in year -one and year two at the troop and at the individual level -(males). To test for differences in space use, we used -troop GPS data, comparing troop home range size -between the 2 years and their composition (with respect -to habitat use). This allowed us to determine whether -baboons used the urban and farm habitats less (where -conflict occurs) following the recommended management -changes. To test for differences in behavior, we described -the location of baboons foraging events and compared -the overall proportion of time invested in foraging, rest- -ing, traveling, and grooming activities, using Wilcoxon -(troop) and Wilcoxon signed rank tests (males). Finally, -we compared the number of public complaints between -the 2 years relevant to this troop in this area in relation -with the other troops in the Cape Peninsula. -3 | RESULTS -3.1 | Year one findings and -recommendations -Full details of year one findings are presented in -Fehlmann et al. - -[Metadata]: {'producer': 'Acrobat Distiller 11.0 (Windows); modified using iText 4.2.0 by 1T3XT', 'creator': 'Arbortext Advanced Print Publisher 9.1.520/W Unicode', 'creationdate': '2023-06-16T15:56:20+05:30', 'keywords': '', 'moddate': '2025-05-27T12:15:01-07:00', 'subject': 'Conservat Sci and Prac 2023.5:e12948', 'wps-proclevel': '3', 'wps-journaldoi': '10.1111/(ISSN)2578-4854', 'title': 'Using behavioral studies to adapt management decisions and reduce negative interactions between humans and baboons in Cape Town, South Africa', 'wps-articledoi': '10.1111/csp2.12948', 'source': 'hwc\\Fehlmann et al. 2022.pdf', 'total_pages': 16, 'page': 6, 'page_label': '7'} - ---- Document #4 --- -likelihood ratio test that compared the modelfit with and without a group- -ing factor (here, the case study ID). -In addition to the scoring consistency of evaluators, we investigated -whether average Effectiveness, CoE, HC, and HP scores changed over the -time period covered by our study cases (1975–2021) or differed according -to the intervention considered (lethal and non-lethal interventions, translo- -cations). We modeled the scores for the four metrics as functions of the in- -tervention type and time (year of publication of the case study) based on the -mixed-effects linear regression models with the evaluator ID and case study -ID used as random factors and the intervention type and publication year -respectively incorporated as qualitative and quantitativefixed-effects ex- -planatory variables. Models were implemented using thelmer function of -the lme4 Rp a c k a g e(Bates et al., 2015). -3. Results -3.1. Features of human-large carnivore conflicts around the world -From our literature search - -[Metadata]: {'producer': 'PyPDF', 'creator': 'Elsevier', 'creationdate': '2022-06-07T02:40:21+00:00', 'author': 'Charlotte Lorand', 'crossmarkdomains[1]': 'elsevier.com', 'crossmarkdomains[2]': 'sciencedirect.com', 'crossmarkdomainexclusive': 'true', 'crossmarkmajorversiondate': '2010-04-23', 'elsevierwebpdfspecifications': '7.0', 'keywords': 'Human-carnivore coexistence; Lethal control; Non-lethal management; Conservation interventions; Effectiveness; Evidence-based', 'moddate': '2022-06-07T02:40:21+00:00', 'subject': 'Science of the Total Environment, 838 (2022) 156195. doi:10.1016/j.scitotenv.2022.156195', 'title': "Effectiveness of interventions for managing human-large carnivore conflicts worldwide: Scare them off, don't remove them", 'doi': '10.1016/j.scitotenv.2022.156195', 'robots': 'noindex', 'source': 'hwc\\Lorand et al. 2022.pdf', 'total_pages': 11, 'page': 4, 'page_label': '5'} - ---- Document #5 --- -Human–wildlife conflicts in a fragmented Amazonian forest -landscape: determinants of large felid depredation on -livestock -F. Michalski1,2, R. L. P. Boulhosa2,3, A. Faria4 & C. A. Peres1 -1 Centre for Ecology, Evolution and Conservation, School of Environmental Sciences, University of East Anglia, Norwich, UK -2 Instituto Pr´o-Carn´ıvoros, Atibaia, SP, Brazil -3 CENAP/IBAMA, Atibaia, SP, Brazil -4 Faculdade de Cieˆncias Biol´ogicas, Universidade Estadual do Mato Grosso, Alta Floresta, MT, Brazil -Keywords -human–wildlife conflicts; large felids; -predation; Brazilian Amazonia. -Correspondence -Fernanda Michalski, Centre for Ecology, -Evolution and Conservation, School of -Environmental Sciences, University of East -Anglia, Norwich NR4 7TJ, UK. -Fax: +44 1603 591327 -Email: F.Michalski@uea.ac.uk -Received 20 September 2005; accepted -5 December 2005 -doi:10.1111/j.1469-1795.2006.00025.x -Abstract -Most large carnivore species are in global decline. Conflicts with people, particu- -larly over depredation on sm - -[Metadata]: {'producer': 'PDFlib PLOP 3.0 (.NET/Win32)/Acrobat Distiller 6.0.1 (Windows); modified using iText 4.2.0 by 1T3XT', 'creator': '3B2 Total Publishing System 8.07f/W', 'creationdate': '2006-03-25T19:46:31+05:30', 'moddate': '2025-05-27T11:47:43-07:00', 'subject': 'Animal Conservation 2006.9:179-188', 'wps-proclevel': '2', 'title': 'Human–wildlife conflicts in a fragmented Amazonian forest landscape: determinants of large felid depredation on livestock', 'wps-articledoi': '10.1111/j.1469-1795.2006.00025.x', 'source': 'hwc\\Michalski et al. 2006.pdf', 'total_pages': 10, 'page': 0, 'page_label': '1'} --
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-test_query = "We live in a suburb and bears sometimes come into our town to eat from our fruit trees and trash. What are the best ways for us to prevent this as a community without removing our fruit trees? Can you check these pdfs to see which ones might help? https://minio.carlboettiger.info/public-data/hwc.zip"
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--🔍 Query: We live in a suburb and bears sometimes come into our town to eat from our fruit trees and trash. What are the best ways for us to prevent this as a community without removing our fruit trees? Can you check these pdfs to see which ones might help? https://minio.carlboettiger.info/public-data/hwc.zip - -📄 Top 5 Retrieved Documents: ------------------------------------------------------------- - ---- Document #1 --- -242 Conflict Intervention Priorities -helps foster more effective collaboration (Game et al. -2013; Lute et al. 2018). Third, both the survey results -and feedback were consistent with recent scholarship -(Redpath et al. 2017) that highlights participatory and -stakeholder-first conflict interventions as best practice -and advocates multipronged (Hazzah et al. 2014) and -adaptive management strategies (Bunnefeld et al. 2017). -Education and awareness programs were often cited in -feedback as being necessary additions to any interven- -tions. However, given the failures of many awareness- -based conservation programs (Schultz 2011), a further -exploration into why and where conservation decision -makers deem them most appropriate is important. Ap- -proaches that are specifically aimed at a particular au- -dience, such as social marketing (Salazar et al. 2018), -may be more effective than simple information provision -or—often-problematic—enforcement (Duffy et al. 2019). -However, how different interventio - -[Metadata]: {'producer': 'Acrobat Distiller 10.1.10 (Windows); modified using iText 4.2.0 by 1T3XT', 'creator': 'LaTeX with hyperref package', 'creationdate': '2020-01-16T12:33:42+05:30', 'keywords': '', 'moddate': '2025-05-27T12:12:25-07:00', 'subject': 'Conservation Biology 2020.34:232-243', 'wps-proclevel': '3', 'wps-journaldoi': '10.1111/(ISSN)1523-1739', 'author': '', 'title': 'Predicting intervention priorities for wildlife conflicts', 'wps-articledoi': '10.1111/cobi.13372', 'source': 'hwc\\Baynham-Herd et al. 2019.pdf', 'total_pages': 12, 'page': 10, 'page_label': '242'} - ---- Document #2 --- -8 - - - - - -Figure A5. Silhouette width plot of the k-medoid partitions with k = 2 to 10 used to estimate the best -number of clusters to describe livestock husbandry systems within the wolf range in northern Portugal -(see the main text for details). - -2 4 6 8 10 -0.20 0.22 0.24 0.26 0.28 0.30 0.32 -Number of clusters -Silhouette Width - -[Metadata]: {'producer': 'PDF Architect 3', 'creator': 'PDF Architect 3', 'creationdate': '2017-01-25T14:50:41+00:00', 'author': 'V. Pimenta', 'moddate': '2017-01-25T14:52:31+00:00', 'source': 'hwc\\Pimenta et al. 2017.pdf', 'total_pages': 20, 'page': 17, 'page_label': '18'} - ---- Document #3 --- -51] and other carnivores, such as coyotes (Canis latrans) [69, 70], African lions (Panthera leo) -[71], and wolves (Canis lupus) [72]. The relative effectiveness of these AC programs for -increasing wariness could relate to several aspects of program implementation. Because we -subjected bears to aversive stimuli as they engaged in problematic behaviour [48, 50], we -increased the likelihood that bears associated the conditioning stimulus (conflict behaviour) -with the unconditioned stimulus (pain/ stress) [38, 52]. This principle of immediacy in aver- -sive conditioning [54] is not achieved when aversive conditioning occurs upon release of a -captured bear, sometimes hours later and kilometres distant from the capture location where -conflict occurred [32]. Repetition of treatments allowed bears to generalize among experiences -instead of associating the painful stimulus with a single location or human individual, which -has been identified as important to AC programs targeting bold coyotes [69 - -[Metadata]: {'producer': 'PDFlib+PDI 9.3.1p2 (C++/Win64)', 'creator': 'PTC Arbortext Layout Developer 12.1.6180/W-x64', 'creationdate': '2023-12-25T16:46:13+05:30', 'title': 'Aversive conditioning increases short-term wariness but does not change habitat use in black bears associated with conflict', 'epsprocessor': 'PStill version 1.84.42', 'author': 'Lori Homstol, Sage Raymond, Claire Edwards, Anthony N. Hamilton, Colleen Cassady St. Clair', 'moddate': '2023-12-25T16:46:13+05:30', 'source': 'hwc\\Homstol et al. 2024.pdf', 'total_pages': 19, 'page': 12, 'page_label': '13'} - ---- Document #4 --- -Fig 1. The effects of AC programs on three metrics of black bear wariness, Whistler BC, 2007–2008. A and B show -the average observed percent change in overt reaction distance and displace ment distance among bears in the AC -Group and the Control Group. Error bars represent standard error. C shows the predicted effect of the number of AC -events conduc ted during the previous 30 days on the likeliho od that a bear will flee from research ers prior to their -beginning AC treatm ent. -https://d oi.org/10.1371/j ournal.pon e.0295989.g0 01 -PLOS ONE -Aversive condition ing of conflict black bears -PLOS ONE | https://doi.or g/10.137 1/journal.po ne.02959 89 January 2, 2024 8 / 19 - -[Metadata]: {'producer': 'PDFlib+PDI 9.3.1p2 (C++/Win64)', 'creator': 'PTC Arbortext Layout Developer 12.1.6180/W-x64', 'creationdate': '2023-12-25T16:46:13+05:30', 'title': 'Aversive conditioning increases short-term wariness but does not change habitat use in black bears associated with conflict', 'epsprocessor': 'PStill version 1.84.42', 'author': 'Lori Homstol, Sage Raymond, Claire Edwards, Anthony N. Hamilton, Colleen Cassady St. Clair', 'moddate': '2023-12-25T16:46:13+05:30', 'source': 'hwc\\Homstol et al. 2024.pdf', 'total_pages': 19, 'page': 7, 'page_label': '8'} - ---- Document #5 --- -* Correspondence: B. F. Blackwell, U.S. Department of Agriculture, Animal and -Plant Health Inspection Service, Wildlife Services, National Wildlife Research -Center, Ohio Field Station, Sandusky, OH, 44870, U.S.A. -E-mail address: bradley.f.blackwell@aphis.usda.gov (B. F. Blackwell). -Contents lists available atScienceDirect -Animal Behaviour -journal homepage: www.elsevier.com/locate/anbehav -http://dx.doi.org/10.1016/j.anbehav.2016.07.013 -0003-3472/Published by Elsevier Ltd on behalf of The Association for the Study of Animal Behaviour. -Animal Behaviour 120 (2016) 245e254 -SPECIAL ISSUE: CONSERVATION BEHAVIOUR - -[Metadata]: {'producer': 'Acrobat Distiller 8.1.0 (Windows)', 'creator': 'Elsevier', 'creationdate': '2016-09-26T20:02:29+05:30', 'crossmarkdomains[2]': 'elsevier.com', 'crossmarkmajorversiondate': '2010-04-23', 'subject': 'Animal Behaviour, 120 (2016) 245-254. doi:10.1016/j.anbehav.2016.07.013', 'author': 'Bradley F. Blackwell', 'elsevierwebpdfspecifications': '6.5', 'crossmarkdomainexclusive': 'true', 'robots': 'noindex', 'moddate': '2016-09-26T20:03:01+05:30', 'doi': '10.1016/j.anbehav.2016.07.013', 'crossmarkdomains[1]': 'sciencedirect.com', 'title': 'No single solution: application of behavioural principles in mitigating human-wildlife conflict', 'source': 'hwc\\Blackwell et al. 2016.pdf', 'total_pages': 10, 'page': 0, 'page_label': '245'} --
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-test_query = "If we live in an area with a lot of wolves, what cattle husbandry strategies should I employ to prevent any sort of wildlife-human conflict? Can you check these pdfs to see which ones might help? https://minio.carlboettiger.info/public-data/hwc.zip"
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--🔍 Query: If we live in an area with a lot of wolves, what cattle husbandry strategies should I employ to prevent any sort of wildlife-human conflict? Can you check these pdfs to see which ones might help? https://minio.carlboettiger.info/public-data/hwc.zip - -📄 Top 5 Retrieved Documents: ------------------------------------------------------------- - ---- Document #1 --- -242 Conflict Intervention Priorities -helps foster more effective collaboration (Game et al. -2013; Lute et al. 2018). Third, both the survey results -and feedback were consistent with recent scholarship -(Redpath et al. 2017) that highlights participatory and -stakeholder-first conflict interventions as best practice -and advocates multipronged (Hazzah et al. 2014) and -adaptive management strategies (Bunnefeld et al. 2017). -Education and awareness programs were often cited in -feedback as being necessary additions to any interven- -tions. However, given the failures of many awareness- -based conservation programs (Schultz 2011), a further -exploration into why and where conservation decision -makers deem them most appropriate is important. Ap- -proaches that are specifically aimed at a particular au- -dience, such as social marketing (Salazar et al. 2018), -may be more effective than simple information provision -or—often-problematic—enforcement (Duffy et al. 2019). -However, how different interventio - -[Metadata]: {'producer': 'Acrobat Distiller 10.1.10 (Windows); modified using iText 4.2.0 by 1T3XT', 'creator': 'LaTeX with hyperref package', 'creationdate': '2020-01-16T12:33:42+05:30', 'keywords': '', 'moddate': '2025-05-27T12:12:25-07:00', 'subject': 'Conservation Biology 2020.34:232-243', 'wps-proclevel': '3', 'wps-journaldoi': '10.1111/(ISSN)1523-1739', 'author': '', 'title': 'Predicting intervention priorities for wildlife conflicts', 'wps-articledoi': '10.1111/cobi.13372', 'source': 'hwc\\Baynham-Herd et al. 2019.pdf', 'total_pages': 12, 'page': 10, 'page_label': '242'} - ---- Document #2 --- -Fig 1. The effects of AC programs on three metrics of black bear wariness, Whistler BC, 2007–2008. A and B show -the average observed percent change in overt reaction distance and displace ment distance among bears in the AC -Group and the Control Group. Error bars represent standard error. C shows the predicted effect of the number of AC -events conduc ted during the previous 30 days on the likeliho od that a bear will flee from research ers prior to their -beginning AC treatm ent. -https://d oi.org/10.1371/j ournal.pon e.0295989.g0 01 -PLOS ONE -Aversive condition ing of conflict black bears -PLOS ONE | https://doi.or g/10.137 1/journal.po ne.02959 89 January 2, 2024 8 / 19 - -[Metadata]: {'producer': 'PDFlib+PDI 9.3.1p2 (C++/Win64)', 'creator': 'PTC Arbortext Layout Developer 12.1.6180/W-x64', 'creationdate': '2023-12-25T16:46:13+05:30', 'title': 'Aversive conditioning increases short-term wariness but does not change habitat use in black bears associated with conflict', 'epsprocessor': 'PStill version 1.84.42', 'author': 'Lori Homstol, Sage Raymond, Claire Edwards, Anthony N. Hamilton, Colleen Cassady St. Clair', 'moddate': '2023-12-25T16:46:13+05:30', 'source': 'hwc\\Homstol et al. 2024.pdf', 'total_pages': 19, 'page': 7, 'page_label': '8'} - ---- Document #3 --- -51] and other carnivores, such as coyotes (Canis latrans) [69, 70], African lions (Panthera leo) -[71], and wolves (Canis lupus) [72]. The relative effectiveness of these AC programs for -increasing wariness could relate to several aspects of program implementation. Because we -subjected bears to aversive stimuli as they engaged in problematic behaviour [48, 50], we -increased the likelihood that bears associated the conditioning stimulus (conflict behaviour) -with the unconditioned stimulus (pain/ stress) [38, 52]. This principle of immediacy in aver- -sive conditioning [54] is not achieved when aversive conditioning occurs upon release of a -captured bear, sometimes hours later and kilometres distant from the capture location where -conflict occurred [32]. Repetition of treatments allowed bears to generalize among experiences -instead of associating the painful stimulus with a single location or human individual, which -has been identified as important to AC programs targeting bold coyotes [69 - -[Metadata]: {'producer': 'PDFlib+PDI 9.3.1p2 (C++/Win64)', 'creator': 'PTC Arbortext Layout Developer 12.1.6180/W-x64', 'creationdate': '2023-12-25T16:46:13+05:30', 'title': 'Aversive conditioning increases short-term wariness but does not change habitat use in black bears associated with conflict', 'epsprocessor': 'PStill version 1.84.42', 'author': 'Lori Homstol, Sage Raymond, Claire Edwards, Anthony N. Hamilton, Colleen Cassady St. Clair', 'moddate': '2023-12-25T16:46:13+05:30', 'source': 'hwc\\Homstol et al. 2024.pdf', 'total_pages': 19, 'page': 12, 'page_label': '13'} - ---- Document #4 --- -3 -Vol.:(0123456789)Scientific RepoRtS | (2020) 10:15341 | https://doi.org/10.1038/s41598-020-72343-6 -www.nature.com/scientificreports/ -numbers increase and more bears need more food26,43,44. Hence, the effectiveness of anti-bear interventions can -be lower than expected when hungry bears become persistent and more aggressive in damaging behaviour. As -high density may lead to more bears involved in conflicts, it also could increase the demand for bear removal45 -and affect the effectiveness of removal techniques such as translocation and lethal control. -In this paper, we compiled a global database of intervention effectiveness against bears and studied how it -is related to bear species and densities, duration of intervention application, and intervention techniques. We -attempted to find and describe the most effective and the least effective interventions against bears. Further, we -tested several hypotheses: (1) lethal control and invasive management are less effective th - -[Metadata]: {'producer': 'Adobe PDF Library 15.0; modified using iText® 5.3.5 ©2000-2012 1T3XT BVBA (SPRINGER SBM; licensed version)', 'creator': 'Springer', 'creationdate': '2020-09-14T15:09:33+05:30', 'crossmarkdomains[1]': 'springer.com', 'moddate': '2020-09-14T15:58:07+02:00', 'crossmarkmajorversiondate': '2010-04-23', 'subject': 'Scientific Reports, https://doi.org/10.1038/s41598-020-72343-6', 'author': 'Igor Khorozyan', 'title': 'Variation and conservation implications of the effectiveness of anti-bear interventions', 'crossmarkdomainexclusive': 'true', 'robots': 'noindex', 'doi': '10.1038/s41598-020-72343-6', 'crossmarkdomains[2]': 'springerlink.com', 'source': 'hwc\\Khorozyan and Waltert 2020.pdf', 'total_pages': 9, 'page': 2, 'page_label': '3'} - ---- Document #5 --- -8 - - - - - -Figure A5. Silhouette width plot of the k-medoid partitions with k = 2 to 10 used to estimate the best -number of clusters to describe livestock husbandry systems within the wolf range in northern Portugal -(see the main text for details). - -2 4 6 8 10 -0.20 0.22 0.24 0.26 0.28 0.30 0.32 -Number of clusters -Silhouette Width - -[Metadata]: {'producer': 'PDF Architect 3', 'creator': 'PDF Architect 3', 'creationdate': '2017-01-25T14:50:41+00:00', 'author': 'V. Pimenta', 'moddate': '2017-01-25T14:52:31+00:00', 'source': 'hwc\\Pimenta et al. 2017.pdf', 'total_pages': 20, 'page': 17, 'page_label': '18'} --
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