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chemCPA

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chemCPA / preprocessing

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History: 1 commit

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a48f0ae 20 days ago

1_lincs.ipynb

683 kB

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1_lincs.py

7.26 kB

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2_lincs_SMILES.ipynb

34.9 kB

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2_lincs_SMILES.py

9.33 kB

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3_lincs_sciplex_comb.py

8.39 kB

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3_lincs_sciplex_gene_matching.ipynb

126 kB

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3_lincs_sciplex_gene_matching.py

16.6 kB

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4_sciplex_SMILES.ipynb

72.1 kB

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4_sciplex_SMILES.py

8.74 kB

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5_sciplex_ood_splits.py

39.4 kB

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6_baseline_sciplex_dataset.ipynb

57.2 kB

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6_baseline_sciplex_dataset.py

2.1 kB

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7_compute_embeddings.ipynb

2.6 kB

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7_compute_embeddings.py

3.08 kB

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README.md

2.47 kB

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analysis_smiles_lincs_trapnell.ipynb

204 kB

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analysis_smiles_lincs_trapnell.py

2.81 kB

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convert_notebooks.sh

887 Bytes

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drug_dict.json

0 Bytes

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notebook_utils.py

1.25 kB

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run_notebooks.py

2.93 kB

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supress_output.py

611 Bytes

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