add callback manager , model app
Browse files- callbackmanager.py +8 -47
- meldrx.py +80 -20
callbackmanager.py
CHANGED
@@ -3,35 +3,22 @@ from meldrx import MeldRxAPI
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import json
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import os
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-
# CallbackManager class to handle OAuth callbacks
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class CallbackManager:
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def __init__(self, redirect_uri: str, client_secret: str = None):
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""
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Initialize the CallbackManager with MeldRx API credentials.
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The client_id and workspace_id are retrieved from environment variables APPID and WORKSPACE_URL.
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-
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Args:
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redirect_uri (str): The redirect URI for the Gradio app (e.g., Space URL + /callback).
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client_secret (str, optional): The client secret (for confidential clients).
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"""
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client_id = os.getenv("APPID") # Retrieve client_id from APPID secret
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if not client_id:
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raise ValueError("APPID environment variable not set. Please configure it in your Space secrets.")
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-
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workspace_id = os.getenv("WORKSPACE_URL") # Retrieve workspace_id from WORKSPACE_URL secret
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if not workspace_id:
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raise ValueError("WORKSPACE_URL environment variable not set. Please configure it in your Space secrets.")
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-
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self.api = MeldRxAPI(client_id, client_secret, workspace_id, redirect_uri)
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self.auth_code = None
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self.access_token = None
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def get_auth_url(self) -> str:
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"""Generate and return the SMART on FHIR authorization URL."""
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return self.api.get_authorization_url()
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def set_auth_code(self, code: str) -> str:
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-
"""Set the authorization code and attempt to get an access token."""
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self.auth_code = code
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if self.api.authenticate_with_code(code):
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self.access_token = self.api.access_token
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@@ -39,7 +26,6 @@ class CallbackManager:
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return "Authentication failed. Please check the code."
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def get_patient_data(self) -> str:
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"""Retrieve patient data using the access token."""
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if not self.access_token:
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return "Not authenticated. Please provide a valid authorization code first."
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patients = self.api.get_patients()
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@@ -47,7 +33,6 @@ class CallbackManager:
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return json.dumps(patients, indent=2) if patients else "No patient data returned."
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return "Failed to retrieve patient data."
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-
# Discharge form display function (unchanged)
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def display_form(
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first_name, last_name, middle_initial, dob, age, sex, address, city, state, zip_code,
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doctor_first_name, doctor_last_name, doctor_middle_initial, hospital_name, doctor_address,
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@@ -88,17 +73,16 @@ def display_form(
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"""
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return form
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# Initialize CallbackManager
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CALLBACK_MANAGER = CallbackManager(
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redirect_uri="https://multitransformer-discharge-guard.hf.space/callback",
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-
client_secret=None # Replace with actual secret if
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)
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-
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with gr.Blocks() as demo:
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gr.Markdown("# Patient Discharge Form with MeldRx Integration")
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-
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# Authentication Section
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with gr.Tab("Authenticate with MeldRx"):
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gr.Markdown("## SMART on FHIR Authentication")
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auth_url_output = gr.Textbox(label="Authorization URL", value=CALLBACK_MANAGER.get_auth_url(), interactive=False)
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@@ -108,77 +92,54 @@ with gr.Blocks() as demo:
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auth_result = gr.Textbox(label="Authentication Result")
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patient_data_button = gr.Button("Fetch Patient Data")
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patient_data_output = gr.Textbox(label="Patient Data")
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-
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-
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fn=CALLBACK_MANAGER.set_auth_code,
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inputs=auth_code_input,
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outputs=auth_result
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)
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patient_data_button.click(
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fn=CALLBACK_MANAGER.get_patient_data,
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inputs=None,
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outputs=patient_data_output
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-
)
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-
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# Discharge Form Section
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with gr.Tab("Discharge Form"):
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gr.Markdown("## Patient Details")
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with gr.Row():
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first_name = gr.Textbox(label="First Name")
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last_name = gr.Textbox(label="Last Name")
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middle_initial = gr.Textbox(label="Middle Initial")
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-
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with gr.Row():
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dob = gr.Textbox(label="Date of Birth")
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age = gr.Textbox(label="Age")
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sex = gr.Textbox(label="Sex")
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-
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address = gr.Textbox(label="Address")
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with gr.Row():
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city = gr.Textbox(label="City")
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state = gr.Textbox(label="State")
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zip_code = gr.Textbox(label="Zip Code")
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-
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gr.Markdown("## Primary Healthcare Professional Details")
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with gr.Row():
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doctor_first_name = gr.Textbox(label="Doctor's First Name")
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doctor_last_name = gr.Textbox(label="Doctor's Last Name")
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doctor_middle_initial = gr.Textbox(label="Middle Initial")
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-
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hospital_name = gr.Textbox(label="Hospital/Clinic Name")
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doctor_address = gr.Textbox(label="Address")
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with gr.Row():
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doctor_city = gr.Textbox(label="City")
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doctor_state = gr.Textbox(label="State")
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doctor_zip = gr.Textbox(label="Zip Code")
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-
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gr.Markdown("## Admission and Discharge Details")
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with gr.Row():
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admission_date = gr.Textbox(label="Date of Admission")
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referral_source = gr.Textbox(label="Source of Referral")
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-
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admission_method = gr.Textbox(label="Method of Admission")
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with gr.Row():
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discharge_date = gr.Textbox(label="Date of Discharge")
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discharge_reason = gr.Radio(["Treated", "Transferred", "Discharge Against Advice", "Patient Died"], label="Discharge Reason")
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-
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date_of_death = gr.Textbox(label="Date of Death (if applicable)")
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-
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gr.Markdown("## Diagnosis & Procedures")
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diagnosis = gr.Textbox(label="Diagnosis")
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procedures = gr.Textbox(label="Operation & Procedures")
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-
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gr.Markdown("## Medication Details")
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medications = gr.Textbox(label="Medication on Discharge")
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-
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gr.Markdown("## Prepared By")
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with gr.Row():
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preparer_name = gr.Textbox(label="Name")
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preparer_job_title = gr.Textbox(label="Job Title")
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-
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submit = gr.Button("Generate Form")
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output = gr.Markdown()
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-
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submit.click(
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display_form,
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inputs=[
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import json
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import os
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class CallbackManager:
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def __init__(self, redirect_uri: str, client_secret: str = None):
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client_id = os.getenv("APPID")
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if not client_id:
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raise ValueError("APPID environment variable not set. Please configure it in your Space secrets.")
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workspace_id = os.getenv("WORKSPACE_URL")
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if not workspace_id:
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raise ValueError("WORKSPACE_URL environment variable not set. Please configure it in your Space secrets.")
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self.api = MeldRxAPI(client_id, client_secret, workspace_id, redirect_uri)
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self.auth_code = None
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self.access_token = None
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def get_auth_url(self) -> str:
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return self.api.get_authorization_url()
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def set_auth_code(self, code: str) -> str:
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self.auth_code = code
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if self.api.authenticate_with_code(code):
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self.access_token = self.api.access_token
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return "Authentication failed. Please check the code."
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def get_patient_data(self) -> str:
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if not self.access_token:
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return "Not authenticated. Please provide a valid authorization code first."
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patients = self.api.get_patients()
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return json.dumps(patients, indent=2) if patients else "No patient data returned."
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return "Failed to retrieve patient data."
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def display_form(
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first_name, last_name, middle_initial, dob, age, sex, address, city, state, zip_code,
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doctor_first_name, doctor_last_name, doctor_middle_initial, hospital_name, doctor_address,
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"""
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return form
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+
# Initialize CallbackManager
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CALLBACK_MANAGER = CallbackManager(
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redirect_uri="https://multitransformer-discharge-guard.hf.space/callback",
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+
client_secret=None # Replace with actual secret if needed
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)
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+
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+
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with gr.Blocks() as demo:
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gr.Markdown("# Patient Discharge Form with MeldRx Integration")
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with gr.Tab("Authenticate with MeldRx"):
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gr.Markdown("## SMART on FHIR Authentication")
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auth_url_output = gr.Textbox(label="Authorization URL", value=CALLBACK_MANAGER.get_auth_url(), interactive=False)
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auth_result = gr.Textbox(label="Authentication Result")
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patient_data_button = gr.Button("Fetch Patient Data")
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patient_data_output = gr.Textbox(label="Patient Data")
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auth_submit.click(fn=CALLBACK_MANAGER.set_auth_code, inputs=auth_code_input, outputs=auth_result)
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patient_data_button.click(fn=CALLBACK_MANAGER.get_patient_data, inputs=None, outputs=patient_data_output)
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with gr.Tab("Discharge Form"):
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gr.Markdown("## Patient Details")
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with gr.Row():
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first_name = gr.Textbox(label="First Name")
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last_name = gr.Textbox(label="Last Name")
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middle_initial = gr.Textbox(label="Middle Initial")
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with gr.Row():
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dob = gr.Textbox(label="Date of Birth")
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age = gr.Textbox(label="Age")
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sex = gr.Textbox(label="Sex")
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address = gr.Textbox(label="Address")
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with gr.Row():
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city = gr.Textbox(label="City")
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state = gr.Textbox(label="State")
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zip_code = gr.Textbox(label="Zip Code")
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gr.Markdown("## Primary Healthcare Professional Details")
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with gr.Row():
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doctor_first_name = gr.Textbox(label="Doctor's First Name")
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doctor_last_name = gr.Textbox(label="Doctor's Last Name")
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doctor_middle_initial = gr.Textbox(label="Middle Initial")
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hospital_name = gr.Textbox(label="Hospital/Clinic Name")
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doctor_address = gr.Textbox(label="Address")
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with gr.Row():
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doctor_city = gr.Textbox(label="City")
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doctor_state = gr.Textbox(label="State")
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doctor_zip = gr.Textbox(label="Zip Code")
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gr.Markdown("## Admission and Discharge Details")
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with gr.Row():
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admission_date = gr.Textbox(label="Date of Admission")
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referral_source = gr.Textbox(label="Source of Referral")
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admission_method = gr.Textbox(label="Method of Admission")
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with gr.Row():
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discharge_date = gr.Textbox(label="Date of Discharge")
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discharge_reason = gr.Radio(["Treated", "Transferred", "Discharge Against Advice", "Patient Died"], label="Discharge Reason")
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date_of_death = gr.Textbox(label="Date of Death (if applicable)")
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gr.Markdown("## Diagnosis & Procedures")
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diagnosis = gr.Textbox(label="Diagnosis")
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procedures = gr.Textbox(label="Operation & Procedures")
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gr.Markdown("## Medication Details")
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medications = gr.Textbox(label="Medication on Discharge")
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gr.Markdown("## Prepared By")
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with gr.Row():
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preparer_name = gr.Textbox(label="Name")
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preparer_job_title = gr.Textbox(label="Job Title")
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submit = gr.Button("Generate Form")
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output = gr.Markdown()
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submit.click(
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display_form,
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inputs=[
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meldrx.py
CHANGED
@@ -1,23 +1,12 @@
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import requests
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import json
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from typing import Optional, Dict, Any
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class MeldRxAPI:
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"""
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A Python class to interact with the MeldRx API, including the MIPS API.
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Provides methods to authenticate, retrieve/update patients, create virtual workspaces,
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and interact with encounter data.
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"""
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def __init__(self, client_id: str, client_secret: str, workspace_id: str, redirect_uri: str):
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"""
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Initialize the MeldRxAPI class with client credentials and workspace ID.
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Args:
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client_id (str): The client ID (App ID) obtained from MeldRx Developer Portal.
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client_secret (str): The client secret for authentication.
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workspace_id (str): The workspace slug/ID to interact with.
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"""
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self.base_url = "https://app.meldrx.com"
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self.api_base_url = f"{self.base_url}/api"
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self.fhir_base_url = f"{self.api_base_url}/fhir/{workspace_id}"
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@@ -29,22 +18,93 @@ class MeldRxAPI:
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self.workspace_id = workspace_id
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self.redirect_uri = redirect_uri
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self.access_token = None
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self.session = requests.Session()
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def
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"""
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-
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payload = {
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"grant_type": "client_credentials",
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"client_id": self.client_id,
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"client_secret": self.client_secret
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}
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headers = {"Content-Type": "application/x-www-form-urlencoded"}
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try:
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response = self.session.post(self.token_url, data=payload, headers=headers)
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response.raise_for_status()
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import requests
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import json
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+
import base64
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import hashlib
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import secrets
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from typing import Optional, Dict, Any
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class MeldRxAPI:
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def __init__(self, client_id: str, client_secret: str, workspace_id: str, redirect_uri: str):
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self.base_url = "https://app.meldrx.com"
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self.api_base_url = f"{self.base_url}/api"
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self.fhir_base_url = f"{self.api_base_url}/fhir/{workspace_id}"
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self.workspace_id = workspace_id
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self.redirect_uri = redirect_uri
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self.access_token = None
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+
self.code_verifier = None # Store the code_verifier for later use
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22 |
self.session = requests.Session()
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23 |
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24 |
+
def _generate_code_verifier(self) -> str:
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"""Generate a random code_verifier string (43-128 characters)."""
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26 |
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self.code_verifier = secrets.token_urlsafe(32) # Generates a 43-character safe string
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return self.code_verifier
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29 |
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def _generate_code_challenge(self, code_verifier: str) -> str:
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30 |
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"""Generate a code_challenge from the code_verifier using SHA-256."""
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31 |
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sha256_hash = hashlib.sha256(code_verifier.encode('utf-8')).digest()
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32 |
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code_challenge = base64.urlsafe_b64encode(sha256_hash).decode('utf-8').rstrip('=')
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33 |
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return code_challenge
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35 |
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def authenticate(self) -> bool:
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payload = {
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"grant_type": "client_credentials",
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"client_id": self.client_id,
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"client_secret": self.client_secret
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}
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headers = {"Content-Type": "application/x-www-form-urlencoded"}
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+
try:
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response = self.session.post(self.token_url, data=payload, headers=headers)
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44 |
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response.raise_for_status()
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45 |
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token_data = response.json()
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46 |
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self.access_token = token_data.get("access_token")
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47 |
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if not self.access_token:
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48 |
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raise ValueError("No access token received from the server.")
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49 |
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return True
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50 |
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except requests.RequestException as e:
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51 |
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print(f"Authentication failed: {e}")
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return False
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53 |
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except ValueError as e:
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54 |
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print(f"Authentication error: {e}")
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55 |
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return False
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57 |
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def _get_headers(self) -> Dict[str, str]:
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58 |
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headers = {"Content-Type": "application/json"}
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59 |
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if self.access_token:
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60 |
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headers["Authorization"] = f"Bearer {self.access_token}"
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61 |
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return headers
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62 |
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63 |
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def get_patients(self) -> Optional[Dict[str, Any]]:
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64 |
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url = f"{self.fhir_base_url}/Patient"
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65 |
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if not self.access_token and not self.authenticate():
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66 |
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print("Cannot proceed without authentication.")
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67 |
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return None
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68 |
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try:
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69 |
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response = self.session.get(url, headers=self._get_headers())
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70 |
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response.raise_for_status()
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71 |
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return response.json() if response.text else {}
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72 |
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except requests.RequestException as e:
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73 |
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print(f"Failed to retrieve patients: {e}")
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74 |
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return None
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75 |
+
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76 |
+
def get_authorization_url(self, scope: str = "patient/*.read openid profile", state: str = "random_state") -> str:
|
77 |
+
"""Generate the SMART on FHIR authorization URL with PKCE."""
|
78 |
+
code_verifier = self._generate_code_verifier()
|
79 |
+
code_challenge = self._generate_code_challenge(code_verifier)
|
80 |
+
params = {
|
81 |
+
"response_type": "code",
|
82 |
+
"client_id": self.client_id,
|
83 |
+
"redirect_uri": self.redirect_uri,
|
84 |
+
"scope": scope,
|
85 |
+
"state": state,
|
86 |
+
"aud": self.fhir_base_url,
|
87 |
+
"code_challenge": code_challenge,
|
88 |
+
"code_challenge_method": "S256" # MeldRx likely expects SHA-256
|
89 |
+
}
|
90 |
+
query_string = "&".join(f"{k}={v}" for k, v in params.items())
|
91 |
+
return f"{self.authorize_url}?{query_string}"
|
92 |
+
|
93 |
+
def authenticate_with_code(self, auth_code: str) -> bool:
|
94 |
+
"""Exchange an authorization code for an access token, including the code_verifier."""
|
95 |
+
if not self.code_verifier:
|
96 |
+
print("Code verifier not set. Generate an authorization URL first.")
|
97 |
+
return False
|
98 |
+
payload = {
|
99 |
+
"grant_type": "authorization_code",
|
100 |
+
"code": auth_code,
|
101 |
+
"redirect_uri": self.redirect_uri,
|
102 |
+
"client_id": self.client_id,
|
103 |
+
"code_verifier": self.code_verifier # Include the code_verifier
|
104 |
+
}
|
105 |
+
if self.client_secret:
|
106 |
+
payload["client_secret"] = self.client_secret
|
107 |
+
headers = {"Content-Type": "application/x-www-form-urlencoded"}
|
108 |
try:
|
109 |
response = self.session.post(self.token_url, data=payload, headers=headers)
|
110 |
response.raise_for_status()
|